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comparison macros.xml @ 83:bcb75754f5e7 draft

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Uploaded
author greg
date Thu, 23 Mar 2017 07:57:48 -0400
parents 3296048d5ea0
children 7484a01c0b21
comparison
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82:7d07e0ebe8c9 83:bcb75754f5e7
30 <param name="options_type" type="select" label="Options Configuration"> 30 <param name="options_type" type="select" label="Options Configuration">
31 <option value="basic" selected="true">Basic</option> 31 <option value="basic" selected="true">Basic</option>
32 <option value="advanced">Advanced</option> 32 <option value="advanced">Advanced</option>
33 </param> 33 </param>
34 </xml> 34 </xml>
35 <xml name="param_orthogroup_fna"> 35 <xml name="cond_orthogroup_fna">
36 <param name="orthogroup_fna" type="select" label="Process corresponding gene family classification orthogroups CDS fasta files?"> 36 <conditional name="orthogroup_fna_cond">
37 <option value="yes" selected="true">Yes</option> 37 <param name="orthogroup_fna" type="select" label="Process corresponding gene family classification orthogroups CDS fasta files?">
38 <option value="no">No</option> 38 <option value="yes" selected="true">Yes</option>
39 </param> 39 <option value="no">No</option>
40 </param>
41 <when value="yes">
42 <conditional name="options_type_cond">
43 <when value="basic" />
44 <when value="advanced">
45 <expand macro="cond_multiple_sequence_alignments" />
46 <expand macro="cond_phylogenetic_trees_ptorthocs" />
47 <expand macro="cond_remove_gappy_sequences" />
48 <expand macro="param_multiple_codon_alignments" />
49 </when>
50 </conditional>
51 </when>
52 <when value="no">
53 <conditional name="options_type_cond">
54 <when value="basic" />
55 <when value="advanced">
56 <expand macro="cond_multiple_sequence_alignments" />
57 <expand macro="cond_phylogenetic_trees_ptorthocs" />
58 <expand macro="cond_remove_gappy_sequences" />
59 </when>
60 </conditional>
61 </when>
62 </conditional>
40 </xml> 63 </xml>
41 <xml name="cond_multiple_sequence_alignments"> 64 <xml name="cond_multiple_sequence_alignments">
42 <conditional name="multiple_sequence_alignments_cond"> 65 <conditional name="multiple_sequence_alignments_cond">
43 <param name="multiple_sequence_alignments" type="select" label="Set multiple sequence alignments options?"> 66 <param name="multiple_sequence_alignments" type="select" label="Set multiple sequence alignments options?">
44 <option value="no" selected="true">No</option> 67 <option value="no" selected="true">No</option>