Mercurial > repos > greg > phylogenomics_analysis

comparison phylogenomics_analysis.xml @ 43:923a54b9425c draft

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author greg
date Fri, 03 Feb 2017 13:41:08 -0500
parents 7e92ab9ee98a
children 3592048fb258
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42:7e92ab9ee98a 43:923a54b9425c
63 #else: 63 #else:
64 #set generate_output_tree = False 64 #set generate_output_tree = False
65 #end if 65 #end if
66 66
67 PhylogenomicsAnalysis 67 PhylogenomicsAnalysis
68 --num_threads \${GALAXY_SLOTS:-4} 68 --num_threads '\${GALAXY_SLOTS:-4}'
69 --orthogroup_faa '$input.extra_files_path' 69 --orthogroup_faa '$input.extra_files_path'
70 --scaffold_dir '$scaffold_dir' 70 --scaffold_dir '$scaffold_dir'
71 --scaffold '$scaffold_selection' 71 --scaffold '$scaffold_selection'
72 --method $method 72 --method $method
73 73