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comparison phylogenomics_analysis.xml @ 100:283f6666daf7 draft

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Uploaded
author greg
date Mon, 27 Mar 2017 10:42:37 -0400
parents de42cdf6e10b
children 5a5f380bbf48
comparison
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99:de42cdf6e10b 100:283f6666daf7
141 <expand macro="cond_orthogroup_fna" /> 141 <expand macro="cond_orthogroup_fna" />
142 </when> 142 </when>
143 </conditional> 143 </conditional>
144 </inputs> 144 </inputs>
145 <outputs> 145 <outputs>
146 <data name="output_ptortho" format="ptortho"> 146 <expand macro="output_ptortho" />
147 <filter>input_format_cond['input_format'] == 'ptortho'</filter> 147 <expand macro="output_ptorthocs" />
148 </data> 148 <expand macro="output_aln" />
149 <data name="output_ptorthocs" format="ptorthocs"> 149 <expand macro="output_tree" />
150 <filter>input_format_cond['input_format'] == 'ptorthocs'</filter>
151 </data>
152 <data name="output_aln" format="ptalign" label="Multiple alignments (method ${options_type_cond['multiple_sequence_alignments_cond']['multiple_sequence_alignments_option_cond']['multiple_sequence_alignments_option']}) on ${on_string}">
153 <filter>options_type_cond['options_type'] == 'advanced' and options_type_cond['multiple_sequence_alignments_cond']['multiple_sequence_alignments'] == 'yes'</filter>
154 </data>
155 <data name="output_tree" format="pttree" label="Phylogenetic trees on ${on_string}">
156 <filter>options_type_cond['options_type'] == 'advanced' and options_type_cond['phylogenetic_trees_cond']['phylogenetic_trees'] == 'yes'</filter>
157 </data>
158 </outputs> 150 </outputs>
159 <tests> 151 <tests>
160 <test> 152 <test>
161 </test> 153 </test>
162 </tests> 154 </tests>