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0
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="R" version="3.1.2">
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4 <repository changeset_revision="1ca39eb16186" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="bmsb" version="1.0">
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7 <install version="1.0">
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8 <actions>
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9 <action type="setup_r_environment">
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10 <repository changeset_revision="1ca39eb16186" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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11 <package name="R" version="3.1.2" />
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1
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12 <package>https://cran.r-project.org/src/contrib/logspline_2.1.9.tar.gz</package>
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0
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13 <package>https://cran.r-project.org/src/contrib/hash_2.2.6.tar.gz</package>
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14 <package>https://cran.r-project.org/src/contrib/uuid_0.1-2.tar.gz</package>
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15 <package>https://cran.r-project.org/src/contrib/getopt_1.20.0.tar.gz</package>
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16 <package>https://cran.r-project.org/src/contrib/optparse_1.3.2.tar.gz</package>
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1
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17 <package>https://cran.r-project.org/src/contrib/jsonlite_1.0.tar.gz</package>
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0
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18 <package>https://cran.r-project.org/src/contrib/rjson_0.2.15.tar.gz</package>
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3
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19 </repository>
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0
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20 </action>
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21 <action type="set_environment">
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22 <environment_variable action="set_to" name="BMSB_ROOT_DIR">$INSTALL_DIR</environment_variable>
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2
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23 <environment_variable action="set_to" name="R_LIBS">$ENV[R_LIBS]</environment_variable>
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24 <environment_variable action="set_to" name="R_INCLUDE_DIR">$ENV[R_INCLUDE_DIR]</environment_variable>
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25 <environment_variable action="prepend_to" name="PATH">$ENV[PATH]</environment_variable>
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0
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26 </action>
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27 </actions>
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28 </install>
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29 <readme>
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30 </readme>
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31 </package>
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32 </tool_dependency>
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