# HG changeset patch # User greg # Date 1544027509 18000 # Node ID 6c93244a36e2f136162f9214110bd98b3d03a4da # Parent 8f2f346a5e1ca1f681edef7b823136a83185a069 Uploaded diff -r 8f2f346a5e1c -r 6c93244a36e2 multilocus_genotype.R --- a/multilocus_genotype.R Tue Dec 04 13:44:12 2018 -0500 +++ b/multilocus_genotype.R Wed Dec 05 11:31:49 2018 -0500 @@ -77,7 +77,7 @@ gind <- new("genind", (as.matrix(gl))); # Add population information to the genind object. -poptab <- read.table(opt$input_pop_info, check.names=FALSE, header=F, na.strings=c("", "NA"), stringsAsFactors = FALSE); +poptab <- read.table(opt$input_pop_info, check.names=FALSE, header=F, na.strings=c("", "NA"), stringsAsFactors=FALSE, sep="\t"); colnames(poptab) <- c("row_id", "affy_id", "user_specimen_id", "region"); gind@pop <- as.factor(poptab$region);