Mercurial > repos > greg > multilocus_genotype

comparison multilocus_genotype.xml @ 1:ba2df0561b12 draft

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Uploaded
author greg
date Thu, 25 Oct 2018 11:10:08 -0400
parents 725b160c91f0
children a7cce4091e80
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0:725b160c91f0 1:ba2df0561b12
13 <command detect_errors="exit_code"><![CDATA[ 13 <command detect_errors="exit_code"><![CDATA[
14 #set output_plots_dir = 'output_plots_dir' 14 #set output_plots_dir = 'output_plots_dir'
15 mkdir $output_plots_dir && 15 mkdir $output_plots_dir &&
16 Rscript '$__tool_directory__/multilocus_genotype.R' 16 Rscript '$__tool_directory__/multilocus_genotype.R'
17 --input_vcf '$input_vcf' 17 --input_vcf '$input_vcf'
18 --input_pop_info 'input_pop_info']]></command> 18 --input_pop_info '$input_pop_info']]></command>
19 <inputs> 19 <inputs>
20 <param name="input_vcf" type="data" format="vcf" label="VCF file" /> 20 <param name="input_vcf" type="data" format="vcf" label="VCF file" />
21 <param name="input_pop_info" type="data" format="txt" label="Population information file" /> 21 <param name="input_pop_info" type="data" format="txt" label="Population information file" />
22 </inputs> 22 </inputs>
23 <outputs> 23 <outputs>