Mercurial > repos > greg > multigps
changeset 22:2e44fe6a99c7 draft
Uploaded
| author | greg |
|---|---|
| date | Tue, 13 Dec 2016 15:07:21 -0500 |
| parents | 6ded14465b74 |
| children | ffefb407c22a |
| files | multigps.xml |
| diffstat | 1 files changed, 10 insertions(+), 10 deletions(-) [+] |
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--- a/multigps.xml Tue Dec 13 14:49:54 2016 -0500 +++ b/multigps.xml Tue Dec 13 15:07:21 2016 -0500 @@ -25,16 +25,17 @@ ## Advanced options ############################ #set aoc = $advanced_options_cond + #set bmsc = $aoc.binding_model_smoothing_cond + #set gmsc = $aoc.gauss_model_smoothing_cond + #set rbec = $aoc.report_binding_events_cond + #set rloc = $aoc.reads_limits_options_cond + #set sdc = $aoc.scale_data_cond + #set umc = $aoc.use_motif_cond + #set mpc = $umc.multigps_priors_cond + #set bmc = $mpc.both_motifs_cond + #set mfoc = $bmc.nomotifprior_cond + #set rgc = $umc.reference_genome_cond #if str($aoc.advanced_options) == 'display': - #set bmsc = $aoc.binding_model_smoothing_cond - #set gmsc = $aoc.gauss_model_smoothing_cond - #set rbec = $aoc.report_binding_events_cond - #set rloc = $aoc.reads_limits_options_cond - #set sdc = $aoc.scale_data_cond - #set umc = $aoc.use_motif_cond - #set mpc = $umc.multigps_priors_cond - #set bmc = $mpc.both_motifs_cond - #set rgc = $umc.reference_genome_cond ############################ ## Limits on how many reads ############################ @@ -132,7 +133,6 @@ --mememaxw $bmc.mememaxw #else: --nomotifs - #set mfoc = $bmc.nomotifprior_cond --nomotifprior $mfoc.nomotifprior #if str($mfoc.nomotifprior) == 'yes': --memenmotifs $mfoc.memenmotifs