# HG changeset patch
# User greg
# Date 1481652400 18000
# Node ID fc857bf9678195d2f3a7ca5f62d2f03a77b23c4c
# Parent  e3d9e74cae682de0ff156ddbb5f33c5b72494377
Uploaded

diff -r e3d9e74cae68 -r fc857bf96781 all_fasta.loc.sample
--- a/all_fasta.loc.sample	Tue Dec 13 13:02:36 2016 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,18 +0,0 @@
-#This file lists the locations and dbkeys of all the fasta files
-#under the "genome" directory (a directory that contains a directory
-#for each build). The script extract_fasta.py will generate the file
-#all_fasta.loc. This file has the format (white space characters are
-#TAB characters):
-#
-#<unique_build_id>  <dbkey> <display_name>  <file_path>
-#
-#So, all_fasta.loc could look something like this:
-#
-#apiMel3    apiMel3 Honeybee (Apis mellifera): apiMel3  /path/to/genome/apiMel3/apiMel3.fa
-#hg19canon  hg19    Human (Homo sapiens): hg19 Canonical    /path/to/genome/hg19/hg19canon.fa
-#hg19full   hg19    Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa
-#
-#Your all_fasta.loc file should contain an entry for each individual
-#fasta file. So there will be multiple fasta files for each build,
-#such as with hg19 above.
-#
diff -r e3d9e74cae68 -r fc857bf96781 tool-data/all_fasta.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/all_fasta.loc.sample	Tue Dec 13 13:06:40 2016 -0500
@@ -0,0 +1,18 @@
+#This file lists the locations and dbkeys of all the fasta files
+#under the "genome" directory (a directory that contains a directory
+#for each build). The script extract_fasta.py will generate the file
+#all_fasta.loc. This file has the format (white space characters are
+#TAB characters):
+#
+#<unique_build_id>  <dbkey> <display_name>  <file_path>
+#
+#So, all_fasta.loc could look something like this:
+#
+#apiMel3    apiMel3 Honeybee (Apis mellifera): apiMel3  /path/to/genome/apiMel3/apiMel3.fa
+#hg19canon  hg19    Human (Homo sapiens): hg19 Canonical    /path/to/genome/hg19/hg19canon.fa
+#hg19full   hg19    Human (Homo sapiens): hg19 Full /path/to/genome/hg19/hg19full.fa
+#
+#Your all_fasta.loc file should contain an entry for each individual
+#fasta file. So there will be multiple fasta files for each build,
+#such as with hg19 above.
+#
diff -r e3d9e74cae68 -r fc857bf96781 tool-data/tool_data_table_conf.xml.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/tool_data_table_conf.xml.sample	Tue Dec 13 13:06:40 2016 -0500
@@ -0,0 +1,7 @@
+<tables>
+    <!-- Locations of all fasta files under genome directory -->
+    <table name="all_fasta" comment_char="#">
+        <columns>value, dbkey, name, path</columns>
+        <file path="tool-data/all_fasta.loc" />
+    </table>
+</tables>
diff -r e3d9e74cae68 -r fc857bf96781 tool_data_table_conf.xml.sample
--- a/tool_data_table_conf.xml.sample	Tue Dec 13 13:02:36 2016 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,7 +0,0 @@
-<tables>
-    <!-- Locations of all fasta files under genome directory -->
-    <table name="all_fasta" comment_char="#">
-        <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/all_fasta.loc" />
-    </table>
-</tables>