Mercurial > repos > greg > multigps
diff test-data/output_process1.txt @ 51:4c5540844bb3 draft default tip
Uploaded
author | greg |
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date | Wed, 05 Sep 2018 08:54:21 -0400 |
parents | 20687c85887e |
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--- a/test-data/output_process1.txt Mon Mar 06 09:17:58 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,49 +0,0 @@ -Using default read distribution. -Providing your own read distribution file is highly recommended. Use --d option. - -Processing HitLoaders for: Abf1 1 -Loading from IDX hit loader: /Users/gvk/work/git_workspace/galaxy/database/files/003/dataset_3093.dat -Estimating scaling ratio for Abf1:1 -Loaded experiments: - Condition Abf1: #Replicates: 1 - Condition Abf1: Rep Abf1:1 - Signal: 0.0 -Finding potential binding regions. -PotentialRegionFilter: genomic threshold for Abf1:1 with bin width 368 = 1 -0 potential regions found. -Initialzing mixture model -Caching sequences -Caching completed -Alpha Abf1 Range=368 1.0 -Global noise per base initialization for Abf1 = 0.0000 -Multi-condition positional priors: A given B:-0.1520 A given notB:-Infinity - -============================ Round 0 ============================ -Updated Abf1:1 read distribution from 0 binding events. -Alpha Abf1 Range=662 1.0 -MEME ExitValue: 1 -Abf1 NOMOTIF - -============================ Round 1 ============================ -Updated Abf1:1 read distribution from 0 binding events. -Alpha Abf1 Range=762 1.0 -MEME ExitValue: 1 -Abf1 NOMOTIF - -============================ Round 2 ============================ -Refined Abf1:1 read distribution from 0 binding events. -Alpha Abf1 Range=762 1.0 -MEME ExitValue: 1 -Abf1 NOMOTIF - -============================ ML read assignment ============================ -Abf1:1 0 signal-noise ratio: NaN -ML read assignment finished. - -============================= Post-processing ============================== -Binding event detection finished! -Binding events are printed to files in /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files beginning with: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files -Events post-analysis - Peak-motif distance histograms - Peak-peak distance histograms (same condition) -Writing results report to: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files/multiGPS_dataset_3100_files_results.html