diff test-data/output_process1.txt @ 51:4c5540844bb3 draft default tip

Uploaded
author greg
date Wed, 05 Sep 2018 08:54:21 -0400
parents 20687c85887e
children
line wrap: on
line diff
--- a/test-data/output_process1.txt	Mon Mar 06 09:17:58 2017 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,49 +0,0 @@
-Using default read distribution.
-Providing your own read distribution file is highly recommended. Use --d option.
-
-Processing HitLoaders for:	Abf1	1
-Loading from IDX hit loader:	/Users/gvk/work/git_workspace/galaxy/database/files/003/dataset_3093.dat
-Estimating scaling ratio for Abf1:1
-Loaded experiments:
- Condition Abf1:	#Replicates:	1
- Condition Abf1:	Rep Abf1:1
-	Signal:	0.0
-Finding potential binding regions.
-PotentialRegionFilter: genomic threshold for Abf1:1 with bin width 368 = 1
-0 potential regions found.
-Initialzing mixture model
-Caching sequences
-Caching completed
-Alpha Abf1	Range=368	1.0
-Global noise per base initialization for Abf1 = 0.0000
-Multi-condition positional priors:	A given B:-0.1520	A given notB:-Infinity
-
-============================ Round 0 ============================
-Updated Abf1:1 read distribution from 0 binding events.
-Alpha Abf1	Range=662	1.0
-MEME ExitValue: 1
-Abf1	NOMOTIF
-
-============================ Round 1 ============================
-Updated Abf1:1 read distribution from 0 binding events.
-Alpha Abf1	Range=762	1.0
-MEME ExitValue: 1
-Abf1	NOMOTIF
-
-============================ Round 2 ============================
-Refined Abf1:1 read distribution from 0 binding events.
-Alpha Abf1	Range=762	1.0
-MEME ExitValue: 1
-Abf1	NOMOTIF
-
-============================ ML read assignment ============================
-Abf1:1	0	signal-noise ratio:	NaN
-ML read assignment finished.
-
-============================= Post-processing ==============================
-Binding event detection finished!
-Binding events are printed to files in /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files beginning with: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files
-Events post-analysis
-	Peak-motif distance histograms
-	Peak-peak distance histograms (same condition)
-Writing results report to: /Users/gvk/work/git_workspace/galaxy/database/job_working_directory/002/2194/dataset_3100_files/multiGPS_dataset_3100_files_results.html