Mercurial > repos > greg > multigps
diff tool-data/fasta_indexes.loc.sample @ 5:7b15099378a7 draft
Uploaded
| author | greg |
|---|---|
| date | Sat, 02 Jan 2016 14:07:37 -0500 |
| parents | 32cff4d1d0ff |
| children |
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--- a/tool-data/fasta_indexes.loc.sample Wed Dec 23 10:34:14 2015 -0500 +++ b/tool-data/fasta_indexes.loc.sample Sat Jan 02 14:07:37 2016 -0500 @@ -5,7 +5,7 @@ #the directories in which those files are stored. The fasta_indexes.loc #file has this format (white space characters are TAB characters): # -# <unique_build_id> <dbkey> <display_name> <file_base_path> +# <unique_build_id> <dbkey> <display_name> <file_base_path> # #So, for example, if you had hg19 Canonical indexed stored in # @@ -13,7 +13,7 @@ # #then the fasta_indexes.loc entry would look like this: # -#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /depot/data2/galaxy/hg19/sam/hg19canon.fa +#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /depot/data2/galaxy/hg19/sam/hg19canon.fa # #and your /depot/data2/galaxy/hg19/sam/ directory #would contain hg19canon.fa and hg19canon.fa.fai files. @@ -23,7 +23,7 @@ #exist, but it should never be directly used. Instead, the name serves #as a prefix for the index file. For example: # -#hg18canon hg18 Human (Homo sapiens): hg18 Canonical /depot/data2/galaxy/hg18/sam/hg18canon.fa -#hg18full hg18 Human (Homo sapiens): hg18 Full /depot/data2/galaxy/hg18/sam/hg18full.fa -#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /depot/data2/galaxy/hg19/sam/hg19canon.fa -#hg19full hg19 Human (Homo sapiens): hg19 Full /depot/data2/galaxy/hg19/sam/hg19full.fa +#hg18canon hg18 Human (Homo sapiens): hg18 Canonical /depot/data2/galaxy/hg18/sam/hg18canon.fa +#hg18full hg18 Human (Homo sapiens): hg18 Full /depot/data2/galaxy/hg18/sam/hg18full.fa +#hg19canon hg19 Human (Homo sapiens): hg19 Canonical /depot/data2/galaxy/hg19/sam/hg19canon.fa +#hg19full hg19 Human (Homo sapiens): hg19 Full /depot/data2/galaxy/hg19/sam/hg19full.fa