Mercurial > repos > greg > multigps
comparison README.rst @ 51:4c5540844bb3 draft default tip
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| author | greg |
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| date | Wed, 05 Sep 2018 08:54:21 -0400 |
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| 50:20687c85887e | 51:4c5540844bb3 |
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| 1 MultiGPS wrapper for Galaxy | |
| 2 ================================ | |
| 3 | |
| 4 * http://mahonylab.org/software/multigps/ | |
| 5 | |
| 6 MultiGPS performs significant EM optimization of binding events along the genome and across experimental | |
| 7 conditions, and it integrates motif-finding via MEME. The tool loads all data into memory, so the potential | |
| 8 exists for time and memory intensive analyses if running over many conditions or large datasets. | |
| 9 | |
| 10 Setting the memory allocation in Galaxy for this tool is handled using the <env id="_JAVA_OPTIONS"> tag for | |
| 11 a selected job runner in the job_conf.xml file. | |
| 12 | |
| 13 License | |
| 14 ------- | |
| 15 | |
| 16 MIT | |
| 17 |