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comparison multigps.xml @ 33:d98548c33a85 draft

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Uploaded
author greg
date Wed, 14 Dec 2016 08:56:30 -0500
parents 7a5a2e70b588
children 9b48edaa54f8
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32:7a5a2e70b588 33:d98548c33a85
44 #set seq_file = str($rgc.reference_genome) 44 #set seq_file = str($rgc.reference_genome)
45 #set tmp_filename = "%s.fa" % str($rgc.reference_genome.dbkey) 45 #set tmp_filename = "%s.fa" % str($rgc.reference_genome.dbkey)
46 #set tmp_seq_file = os.path.join($seq_dir, $tmp_filename) 46 #set tmp_seq_file = os.path.join($seq_dir, $tmp_filename)
47 ln -f -s $tmp_seq_file $seq_file && 47 ln -f -s $tmp_seq_file $seq_file &&
48 #end if 48 #end if
49 --seq_dir $seq_dir 49 --seq $seq_dir
50 #end if 50 #end if
51 ############################ 51 ############################
52 ## Limits on how many reads 52 ## Limits on how many reads
53 ############################ 53 ############################
54 #if str($rloc.reads_limits) == 'yes': 54 #if str($rloc.reads_limits) == 'yes':