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comparison multigps.xml @ 8:949d2dedaedc draft

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author greg
date Sat, 02 Jan 2016 16:52:05 -0500
parents 7b15099378a7
children 426f8753acb2
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7:afba8c2a3b32 8:949d2dedaedc
7 <command> 7 <command>
8 <![CDATA[ 8 <![CDATA[
9 #set aoc = $advanced_options_cond 9 #set aoc = $advanced_options_cond
10 #if str($aoc.advanced_options) == "display": 10 #if str($aoc.advanced_options) == "display":
11 #set umc = $aoc.use_motif_cond 11 #set umc = $aoc.use_motif_cond
12 #set rgc = $umc.reference_genome_cond
13 #if str($umc.use_motif) == "yes": 12 #if str($umc.use_motif) == "yes":
13 #set rgc = $umc.reference_genome_cond
14 #if str($rgc.reference_genome_source) == "cached": 14 #if str($rgc.reference_genome_source) == "cached":
15 #set seq_dir = os.path.split($rgc.reference_genome.fields.path)[0] 15 #set seq_dir = os.path.split($rgc.reference_genome.fields.path)[0]
16 #else: 16 #else:
17 ## MultiGPS requires a directory containing reference files, so symlink the history dataset. 17 ## MultiGPS requires a directory containing reference files, so symlink the history dataset.
18 #import os 18 #import os