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comparison multigps.xml @ 17:426f8753acb2 draft

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Uploaded
author greg
date Fri, 15 Jan 2016 10:07:58 -0500
parents 949d2dedaedc
children e3d9e74cae68
comparison
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16:f90fefd516a5 17:426f8753acb2
178 <option value="cached">Locally Cached</option> 178 <option value="cached">Locally Cached</option>
179 <option value="history">From History</option> 179 <option value="history">From History</option>
180 </param> 180 </param>
181 <when value="cached"> 181 <when value="cached">
182 <param name="reference_genome" type="select" label="Using reference genome"> 182 <param name="reference_genome" type="select" label="Using reference genome">
183 <options from_data_table="fasta_indexes"/> 183 <options from_data_table="all_fasta">
184 <filter type="data_meta" key="dbkey" ref="input_items.input" column="1"/>
185 </options>
184 <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected input file"/> 186 <validator type="no_options" message="A built-in reference genome is not available for the build associated with the selected input file"/>
185 </param> 187 </param>
186 </when> 188 </when>
187 <when value="history"> 189 <when value="history">
188 <param name="reference_genome" type="data" format="fasta" label="Using reference genome"/> 190 <param name="reference_genome" type="data" format="fasta" label="Using reference genome">
191 <options>
192 <filter type="data_meta" key="dbkey" ref="input_items.input"/>
193 </options>
194 <validator type="no_options" message="The current history does not include a fasta dataset with the build associated with the selected input file"/>
195 </param>
189 </when> 196 </when>
190 </conditional> 197 </conditional>
191 <conditional name="multigps_priors_cond"> 198 <conditional name="multigps_priors_cond">
192 <param name="multigps_priors" type="select" label="Specify MultiGPS priors options?"> 199 <param name="multigps_priors" type="select" label="Specify MultiGPS priors options?">
193 <option value="no" selected="True">No</option> 200 <option value="no" selected="True">No</option>