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comparison multigps.xml @ 29:181901dbd7eb draft

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Uploaded
author greg
date Wed, 14 Dec 2016 08:12:50 -0500
parents dc71c15181f9
children 9aca70ab05c2
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28:dc71c15181f9 29:181901dbd7eb
116 #set tmp_filename = "%s.fa" % str($rgc.reference_genome.dbkey) 116 #set tmp_filename = "%s.fa" % str($rgc.reference_genome.dbkey)
117 #set tmp_seq_file = os.path.join($seq_dir, $tmp_filename) 117 #set tmp_seq_file = os.path.join($seq_dir, $tmp_filename)
118 ln -f -s $tmp_seq_file $seq_file && 118 ln -f -s $tmp_seq_file $seq_file &&
119 #end if 119 #end if
120 --seq $seq_dir 120 --seq $seq_dir
121 --geninfo ${chromInfo} 121 --geninfo "$chromInfo"
122 #if str($mpc.multigps_priors) == 'yes': 122 #if str($mpc.multigps_priors) == 'yes':
123 #set bmc = $mpc.both_motifs_cond 123 #set bmc = $mpc.both_motifs_cond
124 #if str($mpc.noposprior) == 'no': 124 #if str($mpc.noposprior) == 'no':
125 --noposprior 125 --noposprior
126 #end if 126 #end if