Mercurial > repos > greg > meme_psp_gen

comparison meme_psp_gen.xml @ 6:73c8585320a9 draft default tip

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author greg
date Mon, 21 Aug 2017 10:14:40 -0400
parents e994f439190c
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5:e994f439190c 6:73c8585320a9
11 -minw $adv.minw 11 -minw $adv.minw
12 -maxw $adv.maxw 12 -maxw $adv.maxw
13 $adv.alphabet 13 $adv.alphabet
14 #if str($adv.triples_cond.triples) == 'yes': 14 #if str($adv.triples_cond.triples) == 'yes':
15 -triples 15 -triples
16 $adv.triples_cond.fixed_start
16 #end if 17 #end if
18 $adv.equiv
19 $adv.consider_both_strands
20 $adv.scale_min
21 $adv.scale_max
22 $adv.max_range
23 $adv.raw
17 #if str($adv.report_scores_cond.report_scores) == 'yes': 24 #if str($adv.report_scores_cond.report_scores) == 'yes':
18 -reportscores 25 -reportscores
26 $adv.report_scores_cond.verbose
19 2> '$output_tabular' 27 2> '$output_tabular'
20 #end if 28 #end if
21 > '$output_psp' 29 > '$output_psp'
22 ]]></command> 30 ]]></command>
23 <inputs> 31 <inputs>