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comparison ks_distribution.R @ 16:b77b3f8781cd draft

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author greg
date Fri, 23 Jun 2017 14:44:53 -0400
parents 1f6943662833
children 828b43bcf2ac
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15:64406daa84f1 16:b77b3f8781cd
1 #!/usr/bin/env Rscript 1 #!/usr/bin/env Rscript
2 2
3 suppressPackageStartupMessages(library("optparse")) 3 suppressPackageStartupMessages(library("optparse"))
4 suppressPackageStartupMessages(library("rjson"))
5 4
6 option_list <- list( 5 option_list <- list(
7 make_option(c("-c", "--components_input"), action="store", dest="components_input", help="Ks significant components input dataset"), 6 make_option(c("-c", "--components_input"), action="store", dest="components_input", help="Ks significant components input dataset"),
8 make_option(c("-k", "--kaks_input"), action="store", dest="kaks_input", help="KaKs analysis input dataset"), 7 make_option(c("-k", "--kaks_input"), action="store", dest="kaks_input", help="KaKs analysis input dataset"),
9 make_option(c("-n", "--num_comp"), action="store", dest="num_comp", type="integer", help="Number of significant components in the Ks distribution"), 8 make_option(c("-n", "--num_comp"), action="store", dest="num_comp", type="integer", help="Number of significant components in the Ks distribution"),