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comparison ks_distribution.xml @ 8:1650842a90ba draft

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author greg
date Thu, 08 Jun 2017 10:32:44 -0400
parents 9831319a19fb
children 214e2710c51e
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7:22cae2172406 8:1650842a90ba
2 <description>plots the distribution of synonymous substitution (Ks) rates and fits significant component(s)</description> 2 <description>plots the distribution of synonymous substitution (Ks) rates and fits significant component(s)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements_ks_distribution" /> 6 <expand macro="requirements_ks_distribution" />
7 <command detect_errors="exit_code"> 7 <command detect_errors="exit_code"><![CDATA[
8 <![CDATA[ 8 Rscript $__tool_directory__/ks_distribution.R
9 Rscript $__tool_directory__/ks_distribution.R 9 -k '$input'
10 -k '$input' 10 -c '$components'
11 -c '$components' 11 -o '$output'
12 -o '$output' 12 ]]></command>
13 ]]>
14 </command>
15 <inputs> 13 <inputs>
16 <param name="input" format="tabular" type="data" label="KaKsAnalysis tabular file" /> 14 <param name="input" format="tabular" type="data" label="KaKsAnalysis tabular file" />
17 <param name="components" format="tabular" type="data" label="Significant components" /> 15 <param name="components" format="tabular" type="data" label="Significant components" />
18 </inputs> 16 </inputs>
19 <outputs> 17 <outputs>