diff kaks_analysis_barplot.xml @ 5:8d18cb8396a7 draft default tip

Uploaded
author greg
date Thu, 16 Mar 2017 14:41:39 -0400
parents a419970e9c19
children
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--- a/kaks_analysis_barplot.xml	Wed Mar 08 14:07:30 2017 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,43 +0,0 @@
-<tool id="kaks_barplot" name="Orthologous or paralogous KaKs barplot" version="1.0.0">
-    <description></description>
-    <requirements>
-         <requirement type="package" version="1.3.0">r-optparse</requirement>
-    </requirements>
-    <command>
-        <![CDATA[
-            Rscript $__tool_directory__/kaks_analysis_barplot.R
-            -k '${kaks}'
-            -c '${components}'
-            -o "$output"
-        ]]>
-    </command>
-    <inputs>
-        <param name="kaks" format="tabular" type="data" label="KaKs analysis file" />
-        <param name="components" format="tabular" type="data" label="Significant components in the ks distribution" />
-    </inputs>
-    <outputs>
-        <data name="output" format="pdf"/>
-    </outputs>
-    <tests>
-        <test>
-            <param name="kaks" value="kaks.tabular" ftype="tabular" />
-            <param name="components" value="components.tabular" ftype="tabular" />
-            <output name="output" file="output.pdf" ftype="pdf" compare="contains" />
-        </test>
-    </tests>
-    <help>
-**What it does**
- 
-Draws a barplot of the significant components in the ks distribution.
-    </help>
-    <citations>
-        <citation type="bibtex">
-            @unpublished{None,
-            author = {Eric Wafula},
-            title = {None},
-            year = {None},
-            url = {https://github.com/dePamphilis/PlantTribes}
-            }
-        </citation>
-    </citations>
-</tool>