Mercurial > repos > greg > kaks_analysis_barplot
diff kaks_analysis_barplot.xml @ 5:8d18cb8396a7 draft default tip
Uploaded
author | greg |
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date | Thu, 16 Mar 2017 14:41:39 -0400 |
parents | a419970e9c19 |
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--- a/kaks_analysis_barplot.xml Wed Mar 08 14:07:30 2017 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,43 +0,0 @@ -<tool id="kaks_barplot" name="Orthologous or paralogous KaKs barplot" version="1.0.0"> - <description></description> - <requirements> - <requirement type="package" version="1.3.0">r-optparse</requirement> - </requirements> - <command> - <![CDATA[ - Rscript $__tool_directory__/kaks_analysis_barplot.R - -k '${kaks}' - -c '${components}' - -o "$output" - ]]> - </command> - <inputs> - <param name="kaks" format="tabular" type="data" label="KaKs analysis file" /> - <param name="components" format="tabular" type="data" label="Significant components in the ks distribution" /> - </inputs> - <outputs> - <data name="output" format="pdf"/> - </outputs> - <tests> - <test> - <param name="kaks" value="kaks.tabular" ftype="tabular" /> - <param name="components" value="components.tabular" ftype="tabular" /> - <output name="output" file="output.pdf" ftype="pdf" compare="contains" /> - </test> - </tests> - <help> -**What it does** - -Draws a barplot of the significant components in the ks distribution. - </help> - <citations> - <citation type="bibtex"> - @unpublished{None, - author = {Eric Wafula}, - title = {None}, - year = {None}, - url = {https://github.com/dePamphilis/PlantTribes} - } - </citation> - </citations> -</tool>