Mercurial > repos > greg > kaks_analysis

changeset 4:7fc692c81c02 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Wed, 01 Mar 2017 11:16:57 -0500
parents bbc153dbaee7
children a0c58fecc07b
files kaks_analysis.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/kaks_analysis.xml	Wed Mar 01 11:13:06 2017 -0500
+++ b/kaks_analysis.xml	Wed Mar 01 11:16:57 2017 -0500
@@ -13,6 +13,7 @@
     </stdio>
     <command>
         <![CDATA[
+            #set comparison = $comparison_cond.comparison
             #if str($options_type.options_type_selector) == 'advanced':
                 #set codeml_ctl_file_cond = $options_type.codeml_ctl_file_cond
                 #set codeml_ctl_file_select = $codeml_ctl_file_cond.codeml_ctl_file_select
@@ -25,7 +26,7 @@
             --coding_sequences_species_1 '$coding_sequences_species_1'
             --proteins_species_1 '$proteins_species_1'
             --comparison $comparison
-            #if str($comparison_cond.comparison) == 'orthologs':
+            #if str($comparison) == 'orthologs':
                 --coding_sequences_species_2 '$comparison_cond.coding_sequences_species_2'
                 --proteins_species_2 '$comparison_cond.proteins_species_2'
             #end if