changeset 42:c0a898a7bf32 draft

Uploaded
author greg
date Sun, 12 Nov 2017 10:18:18 -0500
parents 758c6e5f29a9
children 1b3020d54cbe
files insect_phenology_model.xml
diffstat 1 files changed, 6 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/insect_phenology_model.xml	Thu Nov 09 14:05:36 2017 -0500
+++ b/insect_phenology_model.xml	Sun Nov 12 10:18:18 2017 -0500
@@ -1,8 +1,8 @@
-<?xml version="."?>
 <tool id="insect_phenology_model" name="Insect phenology model" version="1.1.0">
     <description>expressing stage-specific phenology and population dynamics</description>
     <requirements>
-         <requirement type="package" version="1.4.4">r-optparse</requirement>
+        <requirement type="package" version="1.6.0">r-lubridate</requirement>
+        <requirement type="package" version="1.4.4">r-optparse</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 Rscript '$__tool_directory__/insect_phenology_model.R'
@@ -24,8 +24,8 @@
 -y $young_nymph_accum
     ]]></command>
     <inputs>
+        <param name="input" type="data" format="csv" label="Temperature data" />
         <param name="location" type="text" value="" optional="false" label="Location" />
-        <param name="input" type="data" format="csv" label="Temperature data" />
         <param name="replications" type="integer" value="10" min="1" label="Number of replications" />
         <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination" />
         <param name="egg_mort" type="integer" value="1" min="0" label="Adjustment rate for egg mortality" />
@@ -47,9 +47,9 @@
     </outputs>
     <tests>
         <test>
-            <param name="input" value="asheville2014.csv" ftype="csv" />
-            <param name="location" value="Asheville" />
-            <param name="replications" value="3" />
+            <param name="input" value="state_college.csv" ftype="csv" />
+            <param name="location" value="State College PA" />
+            <param name="replications" value="10" />
             <output name="output" file="output.pdf" ftype="pdf" compare="contains" />
         </test>
     </tests>