Mercurial > repos > greg > insect_phenology_model
changeset 21:a61f74f6d165 draft
Uploaded
author | greg |
---|---|
date | Thu, 09 Nov 2017 08:08:59 -0500 |
parents | 20bb9dee4b48 |
children | cd4d17bf3b9e |
files | insect_phenology_model.xml |
diffstat | 1 files changed, 7 insertions(+), 17 deletions(-) [+] |
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--- a/insect_phenology_model.xml Thu Sep 28 14:03:43 2017 -0400 +++ b/insect_phenology_model.xml Thu Nov 09 08:08:59 2017 -0500 @@ -14,26 +14,18 @@ -i $min_clutch_size -j $nymph_mort -k $old_nymph_accum --n $temperature_data.metadata.data_lines +-n $input.metadata.data_lines -o '$output' -p $oviposition -q $photoperiod -s $replications -t $se_plot --u $year --v '$temperature_data' +-v '$input' -y $young_nymph_accum ]]></command> <inputs> - <param name="location" type="select" label="Global Historical Climatology Network Station"> - <options from_file="ghcnd_stations.txt"> - <column name="name" index="1"/> - <column name="value" index="0"/> - <column name="state" index="2"/> - </options> - </param> - <param name="temperature_data" type="data" format="csv" label="Temperature data" /> - <param name="year" type="integer" value="2017" min="1995" label="Temperature data year" /> + <param name="location" type="text" value="" optional="false" label="Location" /> + <param name="input" type="data" format="csv" label="Temperature data" /> <param name="replications" type="integer" value="10" min="1" label="Number of replications" /> <param name="photoperiod" type="float" value="13.5" min="0" label="Critical photoperiod for diapause induction/termination" /> <param name="egg_mort" type="integer" value="1" min="0" label="Adjustment rate for egg mortality" /> @@ -51,13 +43,12 @@ </param> </inputs> <outputs> - <data name="output" format="pdf" label="${tool.name} ${location}, ${year} on ${on_string}" /> + <data name="output" format="pdf" label="${tool.name} ${location}, on ${on_string}" /> </outputs> <tests> <test> - <param name="temperature_data" value="asheville2014.csv" ftype="csv" /> - <param name="location" value="asheville:35.58" /> - <param name="year" value="2014" /> + <param name="input" value="asheville2014.csv" ftype="csv" /> + <param name="location" value="State College" /> <param name="replications" value="3" /> <output name="output" file="output.pdf" ftype="pdf" compare="contains" /> </test> @@ -73,7 +64,6 @@ * **Location** - the location associated with the selected temperature data. * **Temperature data** - select the dataset from your history containing the temperature data. - * **Temperature data year** - the year during which the temperature data was recorded. * **Number of replications** - number of replications. * **Critical photoperiod for diapause induction/termination** - critical photoperiod for diapause induction/termination. * **Adjustment rate for egg mortality** - adjustment rate for egg mortality.