Mercurial > repos > greg > insect_phenology_model

comparison insect_phenology_model.R @ 37:b0126627ade6 draft

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author greg
date Thu, 09 Nov 2017 13:50:13 -0500
parents c2025ecec509
children b81d2443b1b8
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36:c2025ecec509 37:b0126627ade6
199 } 199 }
200 200
201 # Read in the input temperature datafile into a Data Frame object. 201 # Read in the input temperature datafile into a Data Frame object.
202 temperature_data <- read.csv(file=opt$input, header=T, sep=",") 202 temperature_data <- read.csv(file=opt$input, header=T, sep=",")
203 start_date <- temperature_data[c(1:1), 3] 203 start_date <- temperature_data[c(1:1), 3]
204 end_date <- temperature_data[c(opt$num_days:1), 3] 204 end_date <- temperature_data[c(opt$num_days:opt$num_days), 3]
205 raw_data_matrix <- matrix(rep(0, opt$num_days * 6), nrow=opt$num_days) 205 raw_data_matrix <- matrix(rep(0, opt$num_days * 6), nrow=opt$num_days)
206 temperature_file_path <- convert_csv_to_rdata(temperature_data, raw_data_matrix) 206 temperature_file_path <- convert_csv_to_rdata(temperature_data, raw_data_matrix)
207 latitude <- temperature_data[1, 1] 207 latitude <- temperature_data[1, 1]
208 208
209 cat("Number of days: ", opt$num_days, "\n") 209 cat("Number of days: ", opt$num_days, "\n")