Mercurial > repos > greg > insect_phenology_model

comparison insect_phenology_model.xml @ 20:20bb9dee4b48 draft

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author greg
date Thu, 28 Sep 2017 14:03:43 -0400
parents 794d0870441c
children a61f74f6d165
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19:396d95e7ddc0 20:20bb9dee4b48
7 <command detect_errors="exit_code"><![CDATA[ 7 <command detect_errors="exit_code"><![CDATA[
8 Rscript '$__tool_directory__/insect_phenology_model.R' 8 Rscript '$__tool_directory__/insect_phenology_model.R'
9 -a $adult_mort 9 -a $adult_mort
10 -b $adult_accum 10 -b $adult_accum
11 -c $egg_mort 11 -c $egg_mort
12 -d $location.fields.latitude 12 -e '$location'
13 -e '$location.fields.name'
14 -f $max_clutch_size 13 -f $max_clutch_size
15 -i $min_clutch_size 14 -i $min_clutch_size
16 -j $nymph_mort 15 -j $nymph_mort
17 -k $old_nymph_accum 16 -k $old_nymph_accum
18 -n $temperature_data.metadata.data_lines 17 -n $temperature_data.metadata.data_lines
26 -y $young_nymph_accum 25 -y $young_nymph_accum
27 ]]></command> 26 ]]></command>
28 <inputs> 27 <inputs>
29 <param name="location" type="select" label="Global Historical Climatology Network Station"> 28 <param name="location" type="select" label="Global Historical Climatology Network Station">
30 <options from_file="ghcnd_stations.txt"> 29 <options from_file="ghcnd_stations.txt">
31 <column name="name" index="2"/> 30 <column name="name" index="1"/>
32 <column name="value" index="2"/> 31 <column name="value" index="0"/>
33 <column name="latitude" index="1"/> 32 <column name="state" index="2"/>
34 </options> 33 </options>
35 </param> 34 </param>
36 <param name="temperature_data" type="data" format="csv" label="Temperature data" /> 35 <param name="temperature_data" type="data" format="csv" label="Temperature data" />
37 <param name="year" type="integer" value="2017" min="1995" label="Temperature data year" /> 36 <param name="year" type="integer" value="2017" min="1995" label="Temperature data year" />
38 <param name="replications" type="integer" value="10" min="1" label="Number of replications" /> 37 <param name="replications" type="integer" value="10" min="1" label="Number of replications" />