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changeset 17:e8dd7b5e4e95 draft

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Uploaded
author greg
date Thu, 10 Aug 2017 14:46:46 -0400
parents 79acab9c6524
children 54ec2ba55b87
files build_matrix.R
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/build_matrix.R	Thu Aug 10 14:41:35 2017 -0400
+++ b/build_matrix.R	Thu Aug 10 14:46:46 2017 -0400
@@ -15,5 +15,5 @@
 r_matrix <- as.matrix(read.table(opt$input));
 status <- match(r_matrix[,3], missing); 
 r_matrix[,3] <- paste(opt$work_dir, r_matrix[,1], ".", r_matrix[,2], ".bed.gz", sep="");
-r_matrix <- r_matrix[is.na(status)==T,];
-write.table(array(r_matrix, dim=c(length(r_matrix)/3, 3)), opt$output, quote=F, row.names=F, col.names=F);
+r_matrix <- r_matrix[is.na(status)==TRUE,];
+write.table(array(r_matrix, dim=c(length(r_matrix)/3, 3)), opt$output, quote=FALSE, row.names=FALSE, col.names=FALSE);