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Uploaded
author greg
date Tue, 29 Aug 2017 10:37:53 -0400
parents 6f8af8e816d0
children 0c2cf49dfb58
files .shed.yml
diffstat 1 files changed, 17 insertions(+), 0 deletions(-) [+]
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+name: ideas
+owner: greg
+description: |
+  Contains a tool that employs the IDEAS (Integrative and Discriminative Epigenome Annotation System) method for jointly and
+  quantitatively characterizing multivariate epigenetic landscapes in many cell types, tissues or conditions
+homepage_url: http://sites.stat.psu.edu/~yzz2/IDEAS/
+long_description: |
+  Contains a tool that employs the IDEAS (Integrative and Discriminative Epigenome Annotation System) method for jointly and
+  quantitatively characterizing multivariate epigenetic landscapes in many cell types, tissues or conditions. The method
+  accounts for position dependent epigenetic events and detects local cell type relationships, which not only help to improve
+  the accuracy of annotating functional classes of DNA sequences, but also reveal cell type constitutive and specific loci.
+  The method utilizes Bayesian non-parametric techniques to automatically identify the best model size fitting to the data so
+  users do not have to specify the number of states. On the other hand, users can still specify the number of states if desired.
+remote_repository_url: 
+type: unrestricted
+categories:
+- Epigenetics