# HG changeset patch # User greg # Date 1515782596 18000 # Node ID b140097a984e674666784a0f4a335b0d4de1835a # Parent 1dc3ef0a6312161df59659f681af011fbde2f6c5 Uploaded diff -r 1dc3ef0a6312 -r b140097a984e ideas.R --- a/ideas.R Fri Jan 12 13:43:08 2018 -0500 +++ b/ideas.R Fri Jan 12 13:43:16 2018 -0500 @@ -17,7 +17,6 @@ make_option(c("--minerr"), action="store", dest="minerr", type="double", default=NULL, help="Minimum standard deviation for the emission Gaussian distribution"), make_option(c("--norm"), action="store_true", dest="norm", default=FALSE, help="Standardize all datasets"), make_option(c("--output_log"), action="store", dest="output_log", default=NULL, help="Output log file path"), - make_option(c("--output_txt_dir"), action="store", dest="output_txt_dir", help="Directory for output txt files"), make_option(c("--prep_output_config"), action="store", dest="prep_output_config", help="prepMat output config file"), make_option(c("--prior_concentration"), action="store", dest="prior_concentration", type="double", default=NULL, help="Prior concentration"), make_option(c("--project_name"), action="store", dest="project_name", help="Outputs will have this base name"),