# HG changeset patch
# User greg
# Date 1503580688 14400
# Node ID 94182e72e08d198fe843de6fcee8e1c7725039cf
# Parent  20d4dc6941055c0a5e03dd84fef5dee814658c5b
Uploaded

diff -r 20d4dc694105 -r 94182e72e08d ideas.xml
--- a/ideas.xml	Thu Aug 24 09:15:59 2017 -0400
+++ b/ideas.xml	Thu Aug 24 09:18:08 2017 -0400
@@ -111,11 +111,7 @@
     ]]></command>
     <configfiles>
         <configfile name="gen_prep_input_config"><![CDATA[#if str($input_type_cond.input_type) == "datasets":
-    #if str($input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor) == "manual":
-        #for $input_items in $input_type_cond.cell_type_epigenetic_factor_cond.input_repeat:
-${input_items.cell_type_name} ${input_items.epigenetic_factor_name} ${input_items.input}
-        #end for
-    #else if str($input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor) == "extract":
+    #if str($input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor) == "extract":
         #set $cell_type_epigenetic_factor_cond = $input_type_cond.cell_type_epigenetic_factor_cond
         #set $input_name_positions = $cell_type_epigenetic_factor_cond.input_name_positions
         #for $i in $cell_type_epigenetic_factor_cond.input:
@@ -130,6 +126,10 @@
             #end if
 ${cell_type_name} ${epigenetic_factor_name} ${i}
         #end for
+    #else:
+        #for $input_items in $input_type_cond.cell_type_epigenetic_factor_cond.input_repeat:
+${input_items.cell_type_name} ${input_items.epigenetic_factor_name} ${input_items.input}
+        #end for
     #end if
 #end if]]></configfile>
     </configfiles>