# HG changeset patch
# User greg
# Date 1503415874 14400
# Node ID 9298fd6e7443455abe3c1c2225c398fde44b1f2a
# Parent  859687afe7bc86f436c0821a3fd38b4f14a808d6
Uploaded

diff -r 859687afe7bc -r 9298fd6e7443 ideas.xml
--- a/ideas.xml	Tue Aug 22 11:22:09 2017 -0400
+++ b/ideas.xml	Tue Aug 22 11:31:14 2017 -0400
@@ -104,10 +104,34 @@
 -maxerr $max_standard_dev
 -thread \${GALAXY_SLOTS:-4}
 > $output_log
-&& if [ -f *.cluster ] ; then mv *.cluster $output_cluster
-&& if [ -f *.para ] ; then mv *.para $output_para
-&& if [ -f *.profile ] ; then mv *.profile $output_profile
-&& if [ -f *.state ] ; then mv *.state $output_state
+&& for file in ./*.cluster
+do
+    if [ -f "${file}" ]; then
+    mv "${file}" $output_cluster;
+    break
+    fi
+done
+&& for file in ./*.para
+do
+    if [ -f "${file}" ]; then
+    mv "${file}" $output_para;
+    break
+    fi
+done
+&& for file in ./*.profile
+do
+    if [ -f "${file}" ]; then
+    mv "${file}" $output_profile;
+    break
+    fi
+done
+&& for file in ./*.state
+do
+    if [ -f "${file}" ]; then
+    mv "${file}" $output_state;
+    break
+    fi
+done
     ]]></command>
     <configfiles>
         <configfile name="prep_input_config"><![CDATA[#for $input_items in $input_type_cond.input_repeat: