# HG changeset patch # User greg # Date 1503423818 14400 # Node ID 46445e3dc9e201562e7cc07771e59ffc9399ef06 # Parent d899f8b6563567e0e81b7d3f25d3075f7a22d739 Uploaded diff -r d899f8b65635 -r 46445e3dc9e2 ideas.xml --- a/ideas.xml Tue Aug 22 13:37:56 2017 -0400 +++ b/ideas.xml Tue Aug 22 13:43:38 2017 -0400 @@ -90,18 +90,22 @@ #if str($initial_states) != '0.0': -C $initial_states #end if -#if str($max_position_classes) != '0.0': +#if str($max_position_classes) != '0': -P $max_position_classes #end if -#if str($max_cell_type_clusters) != '0.0': +#if str($max_cell_type_clusters) != '0': -K $max_cell_type_clusters #end if #if str($prior_concentration) != '0.0': -A $prior_concentration #end if -sample $burnin_num $mcmc_num --minerr $min_standard_dev --maxerr $max_standard_dev +#if str($min_standard_dev) != '0.0': + -minerr $min_standard_dev +#end if +#if str($max_standard_dev) != '0.0': + -maxerr $max_standard_dev +#end if -thread \${GALAXY_SLOTS:-4} > $output_log && mv ./*.cluster $output_cluster