# HG changeset patch
# User greg
# Date 1503513830 14400
# Node ID 0b7b0929fb3ca22f4fbadb604d13e4130132172a
# Parent  fa1e5f44d79efc4f4d1061f724e072aa59f1de9c
Uploaded

diff -r fa1e5f44d79e -r 0b7b0929fb3c ideas.xml
--- a/ideas.xml	Wed Aug 23 14:39:21 2017 -0400
+++ b/ideas.xml	Wed Aug 23 14:43:50 2017 -0400
@@ -126,17 +126,17 @@
 #end if]]></configfile>
         <configfile name="extract_prep_input_config"><![CDATA[
 #if $input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor == "extract":
-#set $cell_type_epigenetic_factor_cond=$input_type_cond.cell_type_epigenetic_factor_cond
-#set $input_name_positions=$cell_type_epigenetic_factor_cond.input_name_positions
+#set $cell_type_epigenetic_factor_cond = $input_type_cond.cell_type_epigenetic_factor_cond
+#set $input_name_positions = $cell_type_epigenetic_factor_cond.input_name_positions
 #for $i in $cell_type_epigenetic_factor_cond.input:
-    #set $file_name_with_ext="${i##*/}"
-    #set $file_name="${file_name_with_ext%%.*}"
+    #set $file_name_with_ext = "${i##*/}"
+    #set $file_name = "${file_name_with_ext%%.*}"
     #if $input_name_positions == "cell_first":
-        #set $cell_type_name="${file_name%-*}"
-        #set $epigenetic_factor_name="${file_name#*-}"
+        #set $cell_type_name = "${file_name%-*}"
+        #set $epigenetic_factor_name = "${file_name#*-}"
     #else:
-        #set $cell_type_name="${file_name#*-}"
-        #set $epigenetic_factor_name="${file_name%-*}"
+        #set $cell_type_name = "${file_name#*-}"
+        #set $epigenetic_factor_name = "${file_name%-*}"
     #end if
 ${cell_type_name} ${epigenetic_factor_name} ${i}
 #end for