# HG changeset patch
# User greg
# Date 1503581983 14400
# Node ID 09f07994247f865b20874453efc85d1022d20e12
# Parent  f6156d2888a3ec6fca9168b71a5c91d3024e4190
Uploaded

diff -r f6156d2888a3 -r 09f07994247f ideas.xml
--- a/ideas.xml	Thu Aug 24 09:31:10 2017 -0400
+++ b/ideas.xml	Thu Aug 24 09:39:43 2017 -0400
@@ -113,10 +113,10 @@
         <configfile name="gen_prep_input_config"><![CDATA[#import os
 #if str($input_type_cond.input_type) == "datasets":
     #if str($input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor) == "extract":
-        #set $cell_type_epigenetic_factor_cond = $input_type_cond.cell_type_epigenetic_factor_cond
-        #set $input_name_positions = $cell_type_epigenetic_factor_cond.input_name_positions
+        #set cell_type_epigenetic_factor_cond = $input_type_cond.cell_type_epigenetic_factor_cond
+        #set input_name_positions = $cell_type_epigenetic_factor_cond.input_name_positions
         #for $i in $cell_type_epigenetic_factor_cond.input:
-            #set file_name_with_ext = $os.path.basename($i)
+            #set file_name_with_ext = $i.name
             #set file_name = $file_name_with_ext.split(".")[0]
             #if str($input_name_positions) == "cell_first":
                 #set cell_type_name = $file_name.split("-")[0]