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comparison ideas.xml @ 55:fa1e5f44d79e draft

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Uploaded
author greg
date Wed, 23 Aug 2017 14:39:21 -0400
parents 7abcf1870e39
children 0b7b0929fb3c
comparison
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54:7abcf1870e39 55:fa1e5f44d79e
124 ${input_items.cell_type_name} ${input_items.epigenetic_factor_name} ${input_items.input} 124 ${input_items.cell_type_name} ${input_items.epigenetic_factor_name} ${input_items.input}
125 #end for 125 #end for
126 #end if]]></configfile> 126 #end if]]></configfile>
127 <configfile name="extract_prep_input_config"><![CDATA[ 127 <configfile name="extract_prep_input_config"><![CDATA[
128 #if $input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor == "extract": 128 #if $input_type_cond.cell_type_epigenetic_factor_cond.cell_type_epigenetic_factor == "extract":
129 #!/bin/bash
130 #set $cell_type_epigenetic_factor_cond=$input_type_cond.cell_type_epigenetic_factor_cond 129 #set $cell_type_epigenetic_factor_cond=$input_type_cond.cell_type_epigenetic_factor_cond
131 #set $input_name_positions=$cell_type_epigenetic_factor_cond.input_name_positions 130 #set $input_name_positions=$cell_type_epigenetic_factor_cond.input_name_positions
132 #for $i in $cell_type_epigenetic_factor_cond.input: 131 #for $i in $cell_type_epigenetic_factor_cond.input:
133 #set $file_name_with_ext="${i##*/}" 132 #set $file_name_with_ext="${i##*/}"
134 #set $file_name="${file_name_with_ext%%.*}" 133 #set $file_name="${file_name_with_ext%%.*}"