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comparison ideas.xml @ 42:46445e3dc9e2 draft

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Uploaded
author greg
date Tue, 22 Aug 2017 13:43:38 -0400
parents d899f8b65635
children 9264225d796d
comparison
equal deleted inserted replaced
41:d899f8b65635 42:46445e3dc9e2
88 -G $max_states 88 -G $max_states
89 #end if 89 #end if
90 #if str($initial_states) != '0.0': 90 #if str($initial_states) != '0.0':
91 -C $initial_states 91 -C $initial_states
92 #end if 92 #end if
93 #if str($max_position_classes) != '0.0': 93 #if str($max_position_classes) != '0':
94 -P $max_position_classes 94 -P $max_position_classes
95 #end if 95 #end if
96 #if str($max_cell_type_clusters) != '0.0': 96 #if str($max_cell_type_clusters) != '0':
97 -K $max_cell_type_clusters 97 -K $max_cell_type_clusters
98 #end if 98 #end if
99 #if str($prior_concentration) != '0.0': 99 #if str($prior_concentration) != '0.0':
100 -A $prior_concentration 100 -A $prior_concentration
101 #end if 101 #end if
102 -sample $burnin_num $mcmc_num 102 -sample $burnin_num $mcmc_num
103 -minerr $min_standard_dev 103 #if str($min_standard_dev) != '0.0':
104 -maxerr $max_standard_dev 104 -minerr $min_standard_dev
105 #end if
106 #if str($max_standard_dev) != '0.0':
107 -maxerr $max_standard_dev
108 #end if
105 -thread \${GALAXY_SLOTS:-4} 109 -thread \${GALAXY_SLOTS:-4}
106 > $output_log 110 > $output_log
107 && mv ./*.cluster $output_cluster 111 && mv ./*.cluster $output_cluster
108 && mv ./*.para $output_para 112 && mv ./*.para $output_para
109 && mv ./*.profile $output_profile 113 && mv ./*.profile $output_profile