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comparison ideas.xml @ 115:242ff1426fb4 draft

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Uploaded
author greg
date Fri, 17 Nov 2017 09:41:17 -0500
parents ba7238a53377
children e1b21d7e266a
comparison
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114:c89bf5bf4661 115:242ff1426fb4
220 <param name="cell_type_epigenetic_factor" value="extract"/> 220 <param name="cell_type_epigenetic_factor" value="extract"/>
221 <param name="input" value="e001-h3k4me3.bigwig" ftype="bigwig" dbkey="hg19"/> 221 <param name="input" value="e001-h3k4me3.bigwig" ftype="bigwig" dbkey="hg19"/>
222 <param name="input_name_positions" value="cell_first"/> 222 <param name="input_name_positions" value="cell_first"/>
223 <param name="specify_genomic_window" value="yes"/> 223 <param name="specify_genomic_window" value="yes"/>
224 <param name="bed_input" value="genomic_windows.bed" ftype="bed" dbkey="hg19"/> 224 <param name="bed_input" value="genomic_windows.bed" ftype="bed" dbkey="hg19"/>
225 <param name="project_name" value="IDEAS_out"/>
225 <output_collection name="output_txt_collection" type="list"> 226 <output_collection name="output_txt_collection" type="list">
226 <element name="IDEAS_out.cluster" file="IDEAS_out.cluster" ftype="txt"/> 227 <element name="IDEAS_out.cluster" file="IDEAS_out.cluster" ftype="txt"/>
227 <element name="IDEAS_out.parae" file="IDEAS_out.para" ftype="txt"/> 228 <element name="IDEAS_out.parae" file="IDEAS_out.para" ftype="txt"/>
228 <element name="IDEAS_out.profile" file="IDEAS_out.profile" ftype="txt"/> 229 <element name="IDEAS_out.profile" file="IDEAS_out.profile" ftype="txt"/>
229 <element name="IDEAS_out.state" file="IDEAS_out.state" ftype="txt"/> 230 <element name="IDEAS_out.state" file="IDEAS_out.state" ftype="txt"/>
237 <param name="epigenetic_factor_name" value="h3k4me3"/> 238 <param name="epigenetic_factor_name" value="h3k4me3"/>
238 <param name="input" value="e001-h3k4me3.bigwig" ftype="bigwig" dbkey="hg19"/> 239 <param name="input" value="e001-h3k4me3.bigwig" ftype="bigwig" dbkey="hg19"/>
239 </repeat> 240 </repeat>
240 <param name="specify_genomic_window" value="yes"/> 241 <param name="specify_genomic_window" value="yes"/>
241 <param name="bed_input" value="genomic_windows.bed" ftype="bed" dbkey="hg19"/> 242 <param name="bed_input" value="genomic_windows.bed" ftype="bed" dbkey="hg19"/>
243 <param name="project_name" value="IDEAS_out"/>
242 <output_collection name="output_txt_collection" type="list"> 244 <output_collection name="output_txt_collection" type="list">
243 <element name="IDEAS_out.cluster" file="IDEAS_out.cluster" ftype="txt"/> 245 <element name="IDEAS_out.cluster" file="IDEAS_out.cluster" ftype="txt"/>
244 <element name="IDEAS_out.parae" file="IDEAS_out.para" ftype="txt"/> 246 <element name="IDEAS_out.parae" file="IDEAS_out.para" ftype="txt"/>
245 <element name="IDEAS_out.profile" file="IDEAS_out.profile" ftype="txt"/> 247 <element name="IDEAS_out.profile" file="IDEAS_out.profile" ftype="txt"/>
246 <element name="IDEAS_out.state" file="IDEAS_out.state" ftype="txt"/> 248 <element name="IDEAS_out.state" file="IDEAS_out.state" ftype="txt"/>