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comparison ideas.xml @ 119:1d99221369b1 draft

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author greg
date Fri, 17 Nov 2017 11:39:15 -0500
parents 42481a73f73d
children cfa683d96cae
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118:f8a7bf4ca1a7 119:1d99221369b1
10 </requirements> 10 </requirements>
11 <command detect_errors="exit_code"><![CDATA[ 11 <command detect_errors="exit_code"><![CDATA[
12 #set output_dir = "output_dir" 12 #set output_dir = "output_dir"
13 #set tmp_dir = "tmp" 13 #set tmp_dir = "tmp"
14 #set prep_input_config = "prep_input_config.txt" 14 #set prep_input_config = "prep_input_config.txt"
15 #set prep_output_config = '$project_name' 15 #set prep_output_config = "prep_output_config.txt"
16 ############################################## 16 ##############################################
17 ## Create the config file and prepare the data 17 ## Create the config file and prepare the data
18 ############################################## 18 ##############################################
19 #set specify_genomic_window = $specify_genomic_window_cond.specify_genomic_window 19 #set specify_genomic_window = $specify_genomic_window_cond.specify_genomic_window
20 mkdir '$output_dir' && 20 mkdir '$output_dir' &&