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comparison ideas.xml @ 30:1d854705de39 draft

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Uploaded
author greg
date Mon, 14 Aug 2017 11:41:36 -0400
parents 06522a4aae6d
children b78ee5d6a4fd
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29:06522a4aae6d 30:1d854705de39
6 <requirement type="package" version="332">ucsc-bedsort</requirement> 6 <requirement type="package" version="332">ucsc-bedsort</requirement>
7 <requirement type="package" version="332">ucsc-bigwigaverageoverbed</requirement> 7 <requirement type="package" version="332">ucsc-bigwigaverageoverbed</requirement>
8 <requirement type="package" version="1.2.0">ideas</requirement> 8 <requirement type="package" version="1.2.0">ideas</requirement>
9 <requirement type="package" version="1.3.2">r-optparse</requirement> 9 <requirement type="package" version="1.3.2">r-optparse</requirement>
10 </requirements> 10 </requirements>
11 <command><![CDATA[ 11 <command detect_errors="exit_code"><![CDATA[
12 #import os 12 #import os
13 #set tmp_dir = 'tmp' 13 #set tmp_dir = 'tmp'
14 #set prep_output_config = 'prep_output_config.txt' 14 #set prep_output_config = 'prep_output_config.txt'
15 ##set ideas_input_dir = 'ideas_input' 15 ##set ideas_input_dir = 'ideas_input'
16 ##set ideas_matrix_input_file = $os.path.join($ideas_input_dir, 'r_matrix.txt') 16 ##set ideas_matrix_input_file = $os.path.join($ideas_input_dir, 'r_matrix.txt')