Mercurial > repos > greg > gregs_test_repo
comparison CADDSuite-1.0.1/galaxyconfigs/tools/GalaxyConfigGenerator.xml @ 26:2f19ad95a19d
Uploaded https://github.com/downloads/CADDSuite/main/CADDSuite_1.0.1_Linux_x86-64.tar.gz
| author | greg |
|---|---|
| date | Tue, 15 Nov 2011 11:55:29 -0500 |
| parents | 389056b8864a |
| children |
comparison
equal
deleted
inserted
replaced
| 25:a4ddf6ef032d | 26:2f19ad95a19d |
|---|---|
| 1 | |
| 2 <!--This is a configuration file for the integration of a CADDSuite tool into Galaxy (http://usegalaxy.org). This file was automatically generated using GalaxyConfigGenerator, so do not bother to make too many manual modifications.--> | |
| 3 <tool id="galaxyconfiggenerator" name="GalaxyConfigGenerator" version="1.0.1"> | |
| 4 <description>generate galaxy tool-config files</description> | |
| 5 <command interpreter="bash"><![CDATA[../../GalaxyConfigGenerator | |
| 6 #if str( $i ) != '' and str( $i ) != 'None' : | |
| 7 -i "$i" | |
| 8 #end if | |
| 9 #if str( $o ) != '' and str( $o ) != 'None' : | |
| 10 -o "$o" | |
| 11 #end if | |
| 12 #if str( $ignore ) != '' and str( $ignore ) != 'None' : | |
| 13 -ignore "$ignore" | |
| 14 #end if | |
| 15 #if str( $s ) != '' and str( $s ) != 'None' : | |
| 16 -s "$s" | |
| 17 #end if | |
| 18 | tail -n 5 | |
| 19 ]]></command> | |
| 20 <inputs> | |
| 21 <param name="i" optional="false" label="input par-file" type="data" format="data"/> | |
| 22 <param name="ignore" optional="true" label="Optional: tool-parameter to be ignored, i.e. those for which no galaxy config entry should be created" area="true" size="1x5"/> | |
| 23 </inputs> | |
| 24 <outputs> | |
| 25 <data name="o" format="xml"/> | |
| 26 <data name="s" format="data"/> | |
| 27 </outputs> | |
| 28 <help>This tool can be used to create galaxy tool-configuration files. | |
| 29 As input, please supply a parameter-file as written by '-write_par' by all of our tools.</help> | |
| 30 </tool> |