Mercurial > repos > greg > genetrack

comparison genetrack.xml @ 21:c868ac2145c4 draft default tip

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Uploaded
author greg
date Wed, 16 Dec 2015 20:11:17 -0500
parents 2f0dede41f69
children
comparison
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20:2f0dede41f69 21:c868ac2145c4
140 140
141 ----- 141 -----
142 142
143 **Output gff Columns** 143 **Output gff Columns**
144 144
145 1. Chromosome 145 1. Chromosome
146 2. Script 146 2. Script
147 3. Placeholder (no meaning) 147 3. Placeholder (no meaning)
148 4. Start of peak exclusion zone (-e 20) 148 4. Start of peak exclusion zone (-e 20)
149 5. End of peak exclusion zone 149 5. End of peak exclusion zone
150 6. Tag sum (not peak height or area under curve, which LionDB provides) 150 6. Tag sum (not peak height or area under curve, which LionDB provides)
151 7. Strand 151 7. Strand
152 8. Placeholder (no meaning) 152 8. Placeholder (no meaning)
153 9. Attributes (standard deviation of reads located within exclusion zone) = fuzziness of peak 153 9. Attributes (standard deviation of reads located within exclusion zone) = fuzziness of peak
154 154
155 ----- 155 -----
156 156
157 **Considerations** 157 **Considerations**
158 158