Mercurial > repos > greg > genetrack

comparison genetrack.xml @ 19:f45571c6e3dd draft

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Uploaded
author greg
date Wed, 16 Dec 2015 19:59:14 -0500
parents e1d437bd7d36
children 2f0dede41f69
comparison
equal deleted inserted replaced
18:e1d437bd7d36 19:f45571c6e3dd
140 140
141 ----- 141 -----
142 142
143 **Output gff Columns** 143 **Output gff Columns**
144 144
145 1. Chromosome 145 * Chromosome
146 2. Script 146 * Script
147 3. Placeholder (no meaning) 147 * Placeholder (no meaning)
148 4. Start of peak exclusion zone (-e 20) 148 * Start of peak exclusion zone (-e 20)
149 5. End of peak exclusion zone 149 * End of peak exclusion zone
150 6. Tag sum (not peak height or area under curve, which LionDB provides) 150 * Tag sum (not peak height or area under curve, which LionDB provides)
151 7. Strand 151 * Strand
152 8. Placeholder (no meaning) 152 * Placeholder (no meaning)
153 9. Attributes (standard deviation of reads located within exclusion zone) = fuzziness of peak 153 * Attributes (standard deviation of reads located within exclusion zone) = fuzziness of peak
154 154
155 ----- 155 -----
156 156
157 **Considerations** 157 **Considerations**
158 158