Mercurial > repos > greg > genetrack

comparison genetrack.xml @ 18:e1d437bd7d36 draft

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Uploaded
author greg
date Wed, 16 Dec 2015 19:58:06 -0500
parents 5a6ea187933b
children f45571c6e3dd
comparison
equal deleted inserted replaced
17:5a6ea187933b 18:e1d437bd7d36
140 140
141 ----- 141 -----
142 142
143 **Output gff Columns** 143 **Output gff Columns**
144 144
145 1. Chromosome 145 1. Chromosome
146 2. Script 146 2. Script
147 3. Placeholder (no meaning) 147 3. Placeholder (no meaning)
148 4. Start of peak exclusion zone (-e 20) 148 4. Start of peak exclusion zone (-e 20)
149 5. End of peak exclusion zone 149 5. End of peak exclusion zone
150 6. Tag sum (not peak height or area under curve, which LionDB provides) 150 6. Tag sum (not peak height or area under curve, which LionDB provides)
151 7. Strand 151 7. Strand
152 8. Placeholder (no meaning) 152 8. Placeholder (no meaning)
153 9. Attributes (standard deviation of reads located within exclusion zone) = fuzziness of peak 153 9. Attributes (standard deviation of reads located within exclusion zone) = fuzziness of peak
154 154
155 ----- 155 -----
156 156
157 **Considerations** 157 **Considerations**
158 158