Mercurial > repos > greg > gene_family_integrator

comparison gene_family_integrator.xml @ 27:346dc0d9af6f draft

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author greg
date Thu, 05 Oct 2017 14:21:14 -0400
parents b91bf5a51d38
children a22dd6959e5a
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26:b91bf5a51d38 27:346dc0d9af6f
1 <tool id="plant_tribes_gene_family_integrator" name="GeneFamilyIntegrator" version="@WRAPPER_VERSION@.3.0"> 1 <tool id="plant_tribes_gene_family_integrator" name="GeneFamilyIntegrator" version="@WRAPPER_VERSION@.3.0">
2 <description>integrates gene models in pre-computed orthologous gene family clusters with classified gene coding sequences</description> 2 <description>integrates gene models in pre-computed orthologous gene family clusters with classified gene coding sequences</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements_gene_family_integrator" /> 6 <requirements>
7 <requirement type="package" version="1.0.3">plant_tribes_gene_family_integrator</requirement>
8 </requirements>
7 <command detect_errors="exit_code"><![CDATA[ 9 <command detect_errors="exit_code"><![CDATA[
8 #set input_dir = 'input_dir' 10 #set input_dir = 'input_dir'
9 mkdir $input_dir && 11 mkdir $input_dir &&
10 #for $i in $input: 12 #for $i in $input:
11 #set filename = $i.file_name 13 #set filename = $i.file_name