Mercurial > repos > greg > gene_family_classifier

changeset 113:f517eb8b08de draft

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Uploaded
author greg
date Mon, 27 Feb 2017 14:54:23 -0500
parents 9e688af74aae
children 1f357ae51fc4
files gene_family_classifier.py
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.py	Mon Feb 27 14:49:41 2017 -0500
+++ b/gene_family_classifier.py	Mon Feb 27 14:54:23 2017 -0500
@@ -85,8 +85,8 @@
 
 def write_html_output(output, title, dir):
     with open(output, 'w') as fh:
-        fh.write('<html><head><h2>%s</h2></head>\n' % title)
-        fh.write('<body><p/><table cellpadding="5">\n')
+        fh.write('<html><head><h3>%s</h3></head>\n' % title)
+        fh.write('<body><p/><table cellpadding="2">\n')
         fh.write('<tr><th>Size</th><th>Name</th></tr>\n')
         for fname in os.listdir(dir):
             try:
@@ -141,7 +141,7 @@
     src_hmmscan_log = os.path.join(OUTPUT_DIR, 'hmmscan.log')
     if os.path.exists(src_hmmscan_log):
         if args.save_hmmscan_log is None:
-            os.remove(args.hmmscan_log)
+            os.remove(src_hmmscan_log)
         else:
             shutil.move(src_hmmscan_log, args.hmmscan_log)
 # Handle orthogroups outputs.