Mercurial > repos > greg > gene_family_classifier

changeset 19:c4a9c23334a4 draft

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Uploaded
author greg
date Tue, 10 Jan 2017 09:53:25 -0500
parents b14a129fe55f
children 038777896b71
files gene_family_classifier.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.xml	Thu Jan 05 14:01:37 2017 -0500
+++ b/gene_family_classifier.xml	Tue Jan 10 09:53:25 2017 -0500
@@ -48,7 +48,7 @@
                 #end if
             #end if
             --scaffold_dir "${GALAXY_DATA_INDEX_DIR}/plant_tribes/scaffolds"
-            --num_threads \${GALAXY_SLOTS:-4}
+            --num_threads "\${GALAXY_SLOTS:-4}"
             #if str($save_hmmscan_log_cond.classifier) == 'hmmscan' or str($save_hmmscan_log_cond.classifier) == 'both':
                 #if str($save_hmmscan_log_cond.save_hmmscan_log) == 'yes':
                     && mv geneFamilyClassification_dir/hmmscan.log $hmmscan_log