Mercurial > repos > greg > gene_family_classifier

changeset 158:99dca2f67b4a draft

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Uploaded
author greg
date Wed, 04 Oct 2017 14:28:06 -0400
parents 387802cb9170
children 7d4d0e0210fc
files gene_family_classifier.xml
diffstat 1 files changed, 5 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.xml	Wed Oct 04 14:27:45 2017 -0400
+++ b/gene_family_classifier.xml	Wed Oct 04 14:28:06 2017 -0400
@@ -195,8 +195,11 @@
             <filter>save_hmmscan_log_cond['classifier'] in ['hmmscan', 'both'] and save_hmmscan_log_cond['save_hmmscan_log'] == 'yes'</filter>
         </data>
         <collection name="output_orthos" type="list">
-            <discover_datasets pattern="__name__" directory="output_orthos_dir" visible="false" ext="tabular" />
-            <filter>options_type['options_type_selector'] == 'advanced' and options_type['create_orthogroup_cond']['create_orthogroup'] == 'yes' and options_type['specify_single_copy_cond']['specify_single_copy'] == 'no'</filter>
+            <discover_datasets pattern="__name__" directory="geneFamilyClassification_dir" visible="false" ext="tabular" />
+        </collection>
+        <collection name="output_orthogroups_fasta" type="list">
+            <discover_datasets pattern="__name__" directory="output_orthogroups_fasta_dir" visible="false" ext="fasta" />
+            <filter>options_type['options_type_selector'] == 'advanced' and options_type['create_orthogroup_cond']['create_orthogroup'] == 'yes'</filter>
         </collection>
         <collection name="output_single_copy_fasta" type="list">
             <discover_datasets pattern="__name__" directory="output_single_copy_fasta_dir" visible="false" ext="fasta" />