Mercurial > repos > greg > gene_family_classifier

changeset 92:39bfdb4189aa draft

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Uploaded
author greg
date Thu, 23 Feb 2017 15:01:38 -0500
parents 2b311ddff0d4
children 333f817caecc
files gene_family_classifier.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.xml	Thu Feb 23 14:55:21 2017 -0500
+++ b/gene_family_classifier.xml	Thu Feb 23 15:01:38 2017 -0500
@@ -116,12 +116,12 @@
                 #else:
                     #set out_file = $output_ptortho
                 #end if
+                && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true
                 && echo -e "<html>\n<head>\n<title>Galaxy - GeneFamilyClassifier Output</title>\n</head>\n<body>\n<p/>\n<ul>\n" > $out_file
-                ##for $fname in $os.listdir($orthogroups_fasta_src_dir):
-                ##    && echo -e "<li><a href=\"$fname\">$fname</a></li>\n" >> $out_file
-                ##end for
+                #for $fname in $os.listdir($orthogroups_fasta_dest_dir):
+                    && echo -e "<li><a href=\"$fname\">$fname</a></li>\n" >> $out_file
+                #end for
                 && echo -e "</ul>\n</body>\n</html>\n" >> $out_file
-                && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true
             #end if
 
             #if $single_copy_orthogroup: