Mercurial > repos > greg > gene_family_classifier

changeset 91:2b311ddff0d4 draft

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Uploaded
author greg
date Thu, 23 Feb 2017 14:55:21 -0500
parents c6e8f9b9167a
children 39bfdb4189aa
files gene_family_classifier.xml
diffstat 1 files changed, 4 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/gene_family_classifier.xml	Thu Feb 23 14:52:32 2017 -0500
+++ b/gene_family_classifier.xml	Thu Feb 23 14:55:21 2017 -0500
@@ -100,6 +100,7 @@
                     #end if
                 #end if
             #end if
+            >/dev/null
 
             #if str($save_hmmscan_log_cond.classifier) == 'hmmscan' or str($save_hmmscan_log_cond.classifier) == 'both':
                 #if str($save_hmmscan_log_cond.save_hmmscan_log) == 'yes':
@@ -116,9 +117,9 @@
                     #set out_file = $output_ptortho
                 #end if
                 && echo -e "<html>\n<head>\n<title>Galaxy - GeneFamilyClassifier Output</title>\n</head>\n<body>\n<p/>\n<ul>\n" > $out_file
-                #for $fname in $os.listdir($orthogroups_fasta_src_dir):
-                    && echo -e "<li><a href=\"$fname\">$fname</a></li>\n" >> $out_file
-                #end for
+                ##for $fname in $os.listdir($orthogroups_fasta_src_dir):
+                ##    && echo -e "<li><a href=\"$fname\">$fname</a></li>\n" >> $out_file
+                ##end for
                 && echo -e "</ul>\n</body>\n</html>\n" >> $out_file
                 && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true
             #end if