# HG changeset patch # User greg # Date 1487606161 18000 # Node ID 9969b17ae6567209d73442ddc5daa01ef669b048 # Parent 6e859426c8731bcc31f1b5a3c2389f58d8aa800e Uploaded diff -r 6e859426c873 -r 9969b17ae656 gene_family_classifier.xml --- a/gene_family_classifier.xml Fri Feb 17 14:00:43 2017 -0500 +++ b/gene_family_classifier.xml Mon Feb 20 10:56:01 2017 -0500 @@ -118,14 +118,14 @@ && echo -e "#Size\tName" > $output_ptortho && ls -l $orthogroups_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t"$9}' >> $output_ptortho #end if - && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir + && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir || true #end if #if $single_copy_orthogroup: #if $create_ortho_sequences: && echo -e "#Size\tName" > $output_ptsco && ls -l $single_copy_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t"$9}' >> $output_ptsco - && mv $single_copy_fasta_src_dir/* $single_copy_fasta_dest_dir + && mv $single_copy_fasta_src_dir/* $single_copy_fasta_dest_dir || true #end if #end if ]]> @@ -256,8 +256,6 @@ - - This tool is one of the PlantTribes' collection of automated modular analysis pipelines that utilize objective classifications of