# HG changeset patch # User greg # Date 1486398747 18000 # Node ID 8d1dbff426598a04f977e66c0c6ae06160c9a6d3 # Parent 7ba3c31095fbade5f8db747f79340bf30ba41fdb Uploaded diff -r 7ba3c31095fb -r 8d1dbff42659 gene_family_classifier.xml --- a/gene_family_classifier.xml Mon Feb 06 11:05:33 2017 -0500 +++ b/gene_family_classifier.xml Mon Feb 06 11:32:27 2017 -0500 @@ -80,11 +80,11 @@ #if $create_ortho_sequences: #if $create_corresponding_coding_sequences: && echo "#Precomputed orthologous gene family clusters with corresponding coding sequences: `ls $orthogroups_fasta_src_dir | grep f | wc -l` files" > $output_ptcgfcs - && echo -e "#Size"\t\t"File" >> $output_ptcgfcs + && echo -e "#Size\t\tFile" >> $output_ptcgfcs && ls -l $orthogroups_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t\t"$9}' >> $output_ptcgfcs #else: && echo "#Precomputed orthologous gene family clusters: `ls $orthogroups_fasta_src_dir | grep f | wc -l` files" > $output_ptcgf - && echo -e "#Size"\t\t"File" >> $output_ptcgf + && echo -e "#Size\t\tFile" >> $output_ptcgf && ls -l $orthogroups_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t\t"$9}' >> $output_ptcgf #end if && mv $orthogroups_fasta_src_dir/* $dest_dir || true