# HG changeset patch
# User greg
# Date 1486665460 18000
# Node ID 7525307aa1d7d59a56608d0f0c6b1f571ffb2a65
# Parent  774c1ad296e713e5706e295278387e1e1774dede
Uploaded

diff -r 774c1ad296e7 -r 7525307aa1d7 gene_family_classifier.xml
--- a/gene_family_classifier.xml	Thu Feb 09 13:04:32 2017 -0500
+++ b/gene_family_classifier.xml	Thu Feb 09 13:37:40 2017 -0500
@@ -106,10 +106,10 @@
 
             #if $create_ortho_sequences:
                 #if $create_corresponding_coding_sequences:
-                    && echo "#Size\tName" > $output_ptorthocs
+                    && echo -e "#Size\tName" > $output_ptorthocs
                     && ls -l $orthogroups_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t"$9}' >> $output_ptorthocs
                 #else:
-                    && echo "#Size\tName" > $output_ptortho
+                    && echo -e "#Size\tName" > $output_ptortho
                     && ls -l $orthogroups_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t"$9}' >> $output_ptortho
                 #end if
                 && mv $orthogroups_fasta_src_dir/* $orthogroups_fasta_dest_dir
@@ -117,7 +117,7 @@
 
             #if $single_copy_orthogroup:
                 #if $create_ortho_sequences:
-                    && echo "#Size\tName" > $output_ptsco
+                    && echo -e "#Size\tName" > $output_ptsco
                     && ls -l $single_copy_fasta_src_dir | grep f | awk -F ' ' '{print $5"\t"$9}' >> $output_ptsco
                     && mv $single_copy_fasta_src_dir/* $single_copy_fasta_dest_dir
                 #end if